Influenza Virus-Group A Subtyping for H & N

Service type
Molecular Diagnostics/PCR
Description

Subtyping tests are run on samples previously testing positive for influenza virus.
2) Must come with a copy of an USDA shipping permit.
3) Shipping instruction: send next day delivery.
4) Do not pool group/pen samples.

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Influenza Virus-Group A Matrix Real-Time PCR

Service type
Molecular Diagnostics/PCR
Description

Bovine submissions - Please use this form.

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Influenza Virus Sequencing

Service type
Molecular Diagnostics/PCR
Description

Note:A detection PCR will be performed first and charged to the client on all external samples submitted.

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Infectious Bovine Rhinotracheitis (IBR/BHV-1) Real-Time PCR

Service type
Molecular Diagnostics/PCR
Description

Results reported on Wednesdays (samples must be received at least the day before test date). Following the guidelines listed under the Submitted Specimen Requirements will provide an adequate sample volume to conduct this test. If multiple tests are to be requested on a specimen, there may not be adequate sample volume to perform each test. Please submit an adequate sample volume to meet the requirements of each test.

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Hemagglutinating Encephalomyelitis virus (VWD) Real-Time PCR

Service type
Molecular Diagnostics/PCR
Description

Following the guidelines listed under the Submitted Specimen Requirements will provide an adequate sample volume to conduct this test. If multiple tests are to be requested on a specimen, there may not be adequate sample volume to perform each test. Please submit an adequate sample volume to meet the requirements of each test.

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External Sequence Data Analysis

Service type
Molecular Diagnostics/PCR
Description

There will be no additional fee for the analysis and dendrogram maintenance for any sequences performed at the U of MN VDL. H1 clades are determined using the Swine H1 Clade Classification available from the NIAID Influenza Research Database (IRD) [Zhang Y, et al. (2017)] through the web site at http://www.fludb.org. For more information on H1 clade information and methodology, please refer to "A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses." Tavis K.

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Newcastle Disease Matrix USDA Real-Time PCR

Service type
Molecular Diagnostics/PCR
Description

Swabs may be pooled up to 10 per 5 ml BHI tube.  The specimen type(s) listed for this test will provide an adequate sample volume to conduct this test. If multiple tests are to be requested on a specimen, there may not be adequate sample volume to perform each test. Please submit an adequate sample volume to meet the requirements of each test. Routine END testing is done at the Minnesota Poultry Testing Laboratory.

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Eschericia coli Virulence Factors

Service type
Molecular Diagnostics/PCR
Description

Results reported on Fridays. Following the guidelines listed under the Submitted Specimen Requirements will provide an adequate sample volume to conduct this test. If multiple tests are to be requested on a specimen, there may not be adequate sample volume to perform each test. Please submit an adequate sample volume to meet the requirements of each test.

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Erysipelothrix sp. Real-Time PCR

Service type
Molecular Diagnostics/PCR
Description

Results reported on Tuesdays and Thursdays.Following the guidelines listed under the Submitted Specimen Requirements will provide an adequate sample volume to conduct this test. If multiple tests are to be requested on a specimen, there may not be adequate sample volume to perform each test.

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Equine Herpesvirus-1 (EHV-1)

Service type
Molecular Diagnostics/PCR
Description

This test is performed at University of California-Davis. Please contact them for testing information 1-530-752-8700 .

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